PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G05060.1   coiled-coil protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g13220.1 7Oryza sativa3E-8126152650 (0)M
GRMZM2G054028_P01 3.21Zea mays2E-8225554650 (0)M
Zm00001eb280010_P002 agpv5Zea mays2E-8225554650 (0)M
v1_GRMZM2G054028_P01 4a53Zea mays2E-8225554650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 5 C0.124; M0.299; S0.019; _0.328)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 253 aa (-cTP 176)
Molecular Weight 27.84 kDA(-cTP )
PI 9.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help