PPDB

The Plant Proteome Database

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AT1G04990.1   Zinc finger C-x8-C-x5-C-x3-H type family protein

Lab Annot. Zinc finger C-x8-C-x5-C-x3-H type protein
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04990.6 11Arabidopsis thaliana04041001000 (0)_
AT1G04990.2 11Arabidopsis thaliana04041001003 (3)_
AT1G04990.5 11Arabidopsis thaliana040495950 (0)_
Os12g21700.1 7Oryza sativa4E-8141936490 (0)_
Os11g28270.1 7Oryza sativa1E-8041937500 (0)S
Os11g28270.2 7Oryza sativa1E-7941337500 (0)_
Zm00001eb090510_P002 agpv5Zea mays9E-8235839530 (0)_
v1_GRMZM2G146514_P01 4a53Zea mays1E-8142437510 (0)_
Zm00001eb169920_P001 agpv5Zea mays1E-8142437510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GAD-like(2) Torus(5) zf-CCCH(5) zf-CCCH_2(5) zf-CCCH_3(5) zf-CCCH_4(5) zf_CCCH_4
TargetP: Cytoplasm (Class 4 C0.207; M0.256; S0.132; _0.578)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 404 aa (-cTP 375)
Molecular Weight 44.70 kDA(-cTP )
PI 8.40(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1725Detail        [A. thaliana]  
2121Detail       leaf [A. thaliana] Stroma stromacGep
2122Detail       leaf [A. thaliana] Stroma stromacGep

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help