PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G04950.1   TATA BOX ASSOCIATED FACTOR II 59

Lab Annot. TATA BOX ASSOCIATED FACTOR II 59
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04950.2 11Arabidopsis thaliana05491001000 (0)_
AT1G04950.3 11Arabidopsis thaliana05491001000 (0)_
AT1G54360.1 11Arabidopsis thaliana1E-15654746630 (0)_
Os01g32750.1 7Oryza sativa055358745 (5)_
GRMZM2G013908_P01 3.21Zea mays055358756 (0)_
Zm00001eb398430_P001 agpv5Zea mays055358750 (0)_
v1_GRMZM2G013908_P01 4a53Zea mays055358757 (7)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) Histone(2) TAF(1) TAF6_C(1) TFIID-31kDa(2)
TargetP: Cytoplasm (Class 5 C0.061; M0.059; S0.521; _0.551)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 549 aa (-cTP 544)
Molecular Weight 61.36 kDA(-cTP )
PI 7.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help