PPDB

PPDB	The Plant Proteome Database

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AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein

Lab Annot.

ubiquitin-associated (UBA)/TS-N domain-containing protein
Mapman: 29.5.11 protein.degradation.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G04850.2 11 Arabidopsis thaliana 0 324 100 100 0 (0) _
AT5G48690.1 11 Arabidopsis thaliana 9E-89 306 52 70 0 (0) _
AT5G48690.2 11 Arabidopsis thaliana 6E-62 200 53 71 0 (0) M
Os02g30180.1 7 Oryza sativa 0 416 73 85 14 (14) _
Os02g30180.2 7 Oryza sativa 0 416 72 84 14 (14) _
Os02g30180.3 7 Oryza sativa 3E-136 342 71 84 14 (14) _
Zm00001eb181030_P001 agpv5 Zea mays 0 419 73 84 0 (0) _
GRMZM2G028766_P01 3.21 Zea mays 0 419 73 84 16 (15) _
GRMZM2G028766_P02 3.21 Zea mays 0 419 73 84 16 (15) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Gypsy(1) MCM3AP_GANP(1) PUB(2) UBA(1) zf-C2H2_2(2)
TargetP:	Cytoplasm (Class 3 C0.211; M0.066; S0.126; _0.705)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	413 aa (-cTP 396)
Molecular Weight	46.60 kDA(-cTP )
PI	5.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data