PPDB

PPDB	The Plant Proteome Database

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AT1G04790.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G55530.1 11 Arabidopsis thaliana 2E-15 122 36 47 0 (0) _
AT1G26800.1 11 Arabidopsis thaliana 4E-12 64 45 62 0 (0) _
AT1G35625.1 11 Arabidopsis thaliana 5E-11 77 44 61 0 (0) S
Os04g43220.1 7 Oryza sativa 4E-32 94 59 75 0 (0) _
Os04g43220.2 7 Oryza sativa 5E-32 94 59 75 0 (0) _
Os04g43220.3 7 Oryza sativa 5E-32 94 59 75 0 (0) _
GRMZM2G016487_P02 3.21 Zea mays 4E-49 326 37 49 0 (0) M
GRMZM2G016487_P01 3.21 Zea mays 4E-49 326 37 49 0 (0) M
Zm00001eb426420_P007 agpv5 Zea mays 4E-49 326 37 49 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-
TargetP:	Cytoplasm (Class 3 C0.306; M0.047; S0.009; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	634 aa (-cTP 602)
Molecular Weight	71.49 kDA(-cTP )
PI	8.88(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data