PPDB

The Plant Proteome Database

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AT1G04710.1   peroxisomal 3-ketoacyl-CoA thiolase 4

Lab Annot. 3-ketoacyl-CoA thiolase (KAT1)
Mapman: 11.9.4.5 lipid metabolism.lipid degradation.beta-oxidation.acylCoAthioesterase
Curated Location peroxisome (Pubmed: 17951448 17120136 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33150.1 11Arabidopsis thaliana04518693519 (255)M
AT5G48880.2 11Arabidopsis thaliana04507085100 (44)M
AT5G48880.4 11Arabidopsis thaliana045070850 (0)M
Os02g57260.1 7Oryza sativa0446778932 (32)S
Os10g31950.1 7Oryza sativa0448748515 (15)S
Os01g02020.2 6Oryza sativa2E-6640335540 (0)_
v1_GRMZM2G062029_P01 4a53Zea mays0377758844 (44)S
GRMZM5G848768_P03 3.21Zea mays0377758850 (42)S
Zm00001eb258950_P001 agpv5Zea mays036174880 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ACP_syn_III_C(1) Thiolase_C(1) Thiolase_N(1)
TargetP: Mitochondria (Class 5 C0.110; M0.467; S0.015; _0.396)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 443 aa (-cTP 396)
Molecular Weight 46.61 kDA(-cTP )
PI 8.59(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help