PPDB

The Plant Proteome Database

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AT1G04630.1   GRIM-19 protein

Lab Annot. NADPH-DH B 16.6 subunit - Complex I
Mapman: 9.1.1 mitochondrial electron transport / ATP synthesis.NADH-DH.complex I
Curated Location mitochondria (Pubmed: 16407270 )

TAIR curated location: mitochondrion & mitochondrial membrane & NADH dehydrogenase complex (ubiquinone)14671022,16407270
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33220.1 11Arabidopsis thaliana4E-100143979726 (26)_
AT2G33220.2 11Arabidopsis thaliana8E-10014297970 (0)_
Os03g09210.1 7Oryza sativa2E-78139788819 (19)_
Zm00001eb008370_P001 agpv5Zea mays2E-8514381910 (0)_
GRMZM2G070716_P02 3.21Zea mays2E-8514381917 (7)_
v1_GRMZM2G070716_P02 4a53Zea mays2E-8514381916 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GRIM-19(1)
TargetP: Cytoplasm (Class 2 C0.156; M0.047; S0.047; _0.864)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 143 aa (-cTP 89)
Molecular Weight 16.13 kDA(-cTP )
PI 9.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2271Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17660356(tonoplast (Brassica oleracea buds))
18931141(peroxisomes- high&low purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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