PPDB

 The Plant Proteome Database

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AT1G04560.1   AWPM-19-like family protein
Lab Annot. AWPM-19-like protein
Mapman: 34.99 transport.misc
Curated Location oil bodies (Pubmed: 21751352 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G46530.1 11Arabidopsis thaliana5E-2914841620 (0)S
AT5G18970.1 11Arabidopsis thaliana1E-2415639570 (0)S
AT1G29520.1 11Arabidopsis thaliana2E-2315442600 (0)S
Os07g24000.1 7Oryza sativa2E-6915466810 (0)S
Os05g31670.1 7Oryza sativa1E-5814566810 (0)S
Os01g14530.1 7Oryza sativa1E-2515744600 (0)S
GRMZM2G154747_P01 3.21Zea mays5E-7116264790 (0)S
v1_GRMZM2G154747_P02 4a53Zea mays5E-7116264790 (0)S
Zm00001eb306010_P001 agpv5Zea mays5E-7116264790 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AWPM-19(1) DUF4713(2)
TargetP: Secreted (Class 1 C0.002; M0.132; S0.959; _0.020)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 186 aa (-cTP 102)
Molecular Weight 19.85 kDA(-cTP )
PI 9.74(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2236Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help