PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G04390.1   BTB/POZ domain-containing protein

Lab Annot. BTB/POZ domain-containing protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g46240.1 7Oryza sativa3E-6246834510 (0)_
GRMZM2G128485_P03 3.21Zea mays7E-167101633520 (0)C
Zm00001eb273960_P005 agpv5Zea mays7E-167101633520 (0)C
v1_GRMZM2G128485_P03 4a53Zea mays7E-167101633520 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(2) NCD3G(2)
TargetP: Cytoplasm (Class 4 C0.017; M0.378; S0.038; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1002 aa (-cTP 971)
Molecular Weight 112.37 kDA(-cTP )
PI 6.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help