PPDB

PPDB	The Plant Proteome Database

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AT1G04360.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G43420.1 11 Arabidopsis thaliana 4E-132 350 60 72 0 (0) M
AT3G03550.1 11 Arabidopsis thaliana 5E-29 252 34 47 0 (0) _
AT5G17600.1 11 Arabidopsis thaliana 2E-28 226 35 51 0 (0) _
Os02g57460.1 7 Oryza sativa 2E-49 306 33 53 0 (0) _
Os03g05560.1 7 Oryza sativa 3E-34 324 31 46 0 (0) C
Os03g05570.1 7 Oryza sativa 2E-31 152 38 55 0 (0) _
Zm00001eb191210_P001 agpv5 Zea mays 8E-39 170 41 59 0 (0) C
GRMZM2G146228_P01 3.21 Zea mays 8E-39 170 41 59 0 (0) C
v1_GRMZM2G146228_P01 4a53 Zea mays 2E-38 170 41 59 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PRIMA1(1) Prok-RING_1(2) Prok-RING_4(1) Vps39_2(1) zf-ANAPC11(1) zf-C
TargetP:	Cytoplasm (Class 4 C0.308; M0.081; S0.080; _0.519)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	381 aa (-cTP 348)
Molecular Weight	42.62 kDA(-cTP )
PI	7.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data