PPDB

 The Plant Proteome Database

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AT1G04350.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Lab Annot. 2-oxoglutarate-dependent dioxygenase
Mapman: 17.5.1 hormone metabolism.ethylene.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59540.1 11Arabidopsis thaliana036072830 (0)_
AT5G59530.1 11Arabidopsis thaliana036173830 (0)_
AT1G04380.1 11Arabidopsis thaliana035670810 (0)_
Os03g48430.1 7Oryza sativa3E-11036045622 (2)_
Os04g10350.1 7Oryza sativa2E-10036848630 (0)_
Os08g30210.1 7Oryza sativa6E-9636344590 (0)_
GRMZM2G119116_P02 3.21Zea mays1E-11334848650 (0)_
v1_GRMZM2G119116_P02 4a53Zea mays1E-11334848650 (0)_
Zm00001eb419580_P001 agpv5Zea mays1E-11334848650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.107; M0.136; S0.085; _0.897)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 360 aa (-cTP 345)
Molecular Weight 40.80 kDA(-cTP )
PI 5.61(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 17216043(leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help