PPDB

The Plant Proteome Database

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AT1G04340.1   HR-like lesion-inducing protein-like protein

Lab Annot. expressed protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43460.1 11Arabidopsis thaliana4E-87159838815 (15)S
AT5G43460.2 11Arabidopsis thaliana4E-8715983880 (0)S
AT4G14420.1 11Arabidopsis thaliana5E-47158557019 (19)S
Os04g10240.1 7Oryza sativa3E-56158557410 (10)S
Os03g05520.1 7Oryza sativa6E-51157567523 (23)S
Os10g30860.1 7Oryza sativa1E-40135487322 (22)S
GRMZM2G157354_P03 3.21Zea mays8E-5115853712 (2)S
Zm00001eb419550_P002 agpv5Zea mays8E-5115853710 (0)S
v1_GRMZM2G157354_P01 4a53Zea mays7E-5015853713 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DoxX(2) HR_lesion(1) SURF4(1)
TargetP: Secreted (Class 1 C0.003; M0.083; S0.899; _0.067)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 2 TMs
TAT position:
Length 159 aa (-cTP 125)
Molecular Weight 17.40 kDA(-cTP )
PI 9.65(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help