PPDB

 The Plant Proteome Database

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AT1G04300.2   TRAF-like superfamily protein
Lab Annot. TRAF-like protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04300.3 11Arabidopsis thaliana098497981 (1)_
AT1G04300.5 11Arabidopsis thaliana0101094960 (0)M
AT1G04300.4 11Arabidopsis thaliana095799991 (1)_
Os12g40520.1 7Oryza sativa4E-16245758720 (0)_
Os01g56800.3 7Oryza sativa4E-13752551650 (0)_
Os01g56800.2 7Oryza sativa4E-13752551650 (0)_
Zm00001eb135380_P004 agpv5Zea mays6E-168102940550 (0)_
v1_GRMZM2G145300_P01 4a53Zea mays7E-168102940550 (0)_
GRMZM2G145300_P01 3.21Zea mays7E-168102940550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: MATH(2)
TargetP: Secreted (Class 1 C0.012; M0.028; S0.981; _0.038)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 997 aa (-cTP 934)
Molecular Weight 111.02 kDA(-cTP )
PI 6.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt

* For details about the exprimental sources click here.

Published Proteomics Data

 20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help