PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G04290.1   Thioesterase superfamily protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04290.2 11Arabidopsis thaliana3E-751081001000 (0)_
AT2G29590.1 11Arabidopsis thaliana4E-2216036561 (0)_
AT3G61200.1 11Arabidopsis thaliana7E-14120325521 (15)_
Os01g65950.1 7Oryza sativa1E-4212851720 (0)_
Os04g35590.1 7Oryza sativa4E-3915645630 (0)_
Os01g12920.1 7Oryza sativa3E-1711239580 (0)C
GRMZM5G885706_P02 3.21Zea mays7E-4514850686 (6)_
Zm00001eb434530_P001 agpv5Zea mays7E-4514850680 (0)_
GRMZM2G009888_P01 3.21Zea mays1E-4115546630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 4HBT(1) 4HBT_3(1) DUF4442(1)
TargetP: Cytoplasm (Class 1 C0.075; M0.063; S0.064; _0.926)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 155 aa (-cTP 61)
Molecular Weight 16.89 kDA(-cTP )
PI 7.85(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19329564(peroxisomes (leaf))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help