PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G04120.1   multidrug resistance-associated protein 5

Lab Annot. ATMRP5 (multidrug resistance-associated protein 5)
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04120.2 11Arabidopsis thaliana0151499992 (2)S
AT1G04120.3 11Arabidopsis thaliana0151497970 (0)S
AT3G13080.1 11Arabidopsis thaliana0141152690 (0)_
Os03g04920.1 7Oryza sativa0145470820 (0)S
Os01g07870.1 7Oryza sativa0141051690 (0)_
Os01g67580.1 7Oryza sativa0135147660 (0)_
Zm00001eb003490_P001 agpv5Zea mays0144071830 (0)S
Zm00001eb072510_P001 agpv5Zea mays0150248670 (0)_
GRMZM2G032218_P02 3.21Zea mays0150248670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_15(2) AAA_16(2) AAA_18(2) AAA_21(2) AAA_22(2) AAA_23(1) AAA_24(2) AAA_29(2)
TargetP: Secreted (Class 2 C0.011; M0.079; S0.770; _0.143)
Predotar:
Subcel. Location:
TM-HMM prediction: 14 TMs
Aramemnon: 13 TMs
TAT position:
Length 1514 aa (-cTP 1455)
Molecular Weight 168.57 kDA(-cTP )
PI 7.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(vacuole-LOPIT-callus)
17151019(vacuole - suspension cell)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help