PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G03905.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot. ABC transporter protein
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44110.1 11Arabidopsis thaliana4E-172290838915 (15)_
AT1G03905.4 11Arabidopsis thaliana3E-1692261001000 (0)_
AT1G03905.3 11Arabidopsis thaliana3E-1692261001000 (0)_
Os02g56550.1 7Oryza sativa4E-161280768821 (21)_
Os03g20170.1 7Oryza sativa7E-9424957720 (0)_
Os02g09720.1 7Oryza sativa2E-0825027411 (1)_
Zm00001eb191710_P003 agpv5Zea mays2E-15828176860 (0)_
v1_GRMZM2G075336_P02 4a53Zea mays2E-15828176867 (7)_
GRMZM2G075336_P02 3.21Zea mays2E-15828176866 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(1) AAA_13(1) AAA_14(1) AAA_15(1) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(2) AAA
TargetP: Cytoplasm (Class 2 C0.139; M0.076; S0.064; _0.886)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 290 aa (-cTP 244)
Molecular Weight 32.42 kDA(-cTP )
PI 6.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help