PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G03840.2   C2H2 and C2HC zinc fingers superfamily protein
Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03840.1 11Arabidopsis thaliana050699990 (0)_
AT5G44160.1 11Arabidopsis thaliana052264700 (0)C
AT5G44160.2 11Arabidopsis thaliana046864710 (0)_
Os01g14010.1 7Oryza sativa7E-11217887930 (0)C
Os09g38340.2 7Oryza sativa9E-10316484930 (0)C
Os09g38340.1 7Oryza sativa9E-10316484930 (0)C
GRMZM5G828179_P01 3.21Zea mays6E-11545846570 (0)C
v1_GRMZM2G179677_P01 4a53Zea mays6E-11141547580 (0)C
GRMZM2G179677_P01 3.21Zea mays6E-11141547580 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NRIP1_repr_2(1) zf-C2H2(3) zf-C2H2_4(3) zf-C2H2_jaz(2) zf-H2C2_2(3) zf-met(3) zf
TargetP: Cytoplasm (Class 2 C0.145; M0.079; S0.030; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 504 aa (-cTP 465)
Molecular Weight 55.61 kDA(-cTP )
PI 8.74(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help