PPDB

 The Plant Proteome Database

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AT1G03840.1   C2H2 and C2HC zinc fingers superfamily protein
Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03840.2 11Arabidopsis thaliana050699990 (0)_
AT5G44160.1 11Arabidopsis thaliana052264700 (0)C
AT5G44160.2 11Arabidopsis thaliana046864710 (0)_
Os01g14010.1 7Oryza sativa2E-11517888930 (0)C
Os01g09850.2 7Oryza sativa2E-10616687920 (0)_
Os01g09850.1 7Oryza sativa2E-10616687920 (0)_
GRMZM5G828179_P01 3.21Zea mays5E-11646046570 (0)C
v1_GRMZM2G179677_P04 4a53Zea mays8E-11441747580 (0)C
GRMZM2G179677_P04 3.21Zea mays8E-11441747580 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NRIP1_repr_2(1) zf-C2H2(3) zf-C2H2_4(3) zf-C2H2_jaz(2) zf-H2C2_2(3) zf-met(3) zf
TargetP: Cytoplasm (Class 2 C0.144; M0.070; S0.026; _0.919)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 506 aa (-cTP 467)
Molecular Weight 55.83 kDA(-cTP )
PI 8.64(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help