PPDB

 The Plant Proteome Database

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AT1G03457.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03457.2 11Arabidopsis thaliana043897970 (0)_
AT1G03457.3 11Arabidopsis thaliana03241001000 (0)_
AT4G03110.1 11Arabidopsis thaliana0418728210 (0)_
Os01g71200.1 7Oryza sativa4E-16442858737 (7)_
Os05g30980.1 7Oryza sativa1E-16243258711 (1)_
Os05g30980.2 7Oryza sativa5E-14538758711 (1)_
GRMZM2G005459_P01 3.21Zea mays3E-16442557721 (1)_
Zm00001eb363310_P001 agpv5Zea mays3E-16442557720 (0)_
v1_GRMZM2G005459_P01 4a53Zea mays3E-16442557722 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4944(2) Limkain-b1(2) RNA_bind(3) RRM_1(3) RRM_5(3) RRM_7(3) RRM_occluded(2)
TargetP: Cytoplasm (Class 2 C0.058; M0.146; S0.084; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 429 aa (-cTP 423)
Molecular Weight 47.62 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help