PPDB

 The Plant Proteome Database

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AT1G03400.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Lab Annot. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
Mapman: 17.5.1 hormone metabolism.ethylene.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03400.2 11Arabidopsis thaliana037992920 (0)_
AT1G03410.1 11Arabidopsis thaliana036172830 (0)S
AT1G03410.2 11Arabidopsis thaliana036172830 (0)_
Os03g48430.1 7Oryza sativa6E-9735943592 (2)_
Os04g10350.1 7Oryza sativa2E-9035343610 (0)_
Os06g14400.1 7Oryza sativa2E-8635841560 (0)_
GRMZM2G119116_P02 3.21Zea mays6E-11134446640 (0)_
v1_GRMZM2G119116_P02 4a53Zea mays6E-11134446640 (0)_
Zm00001eb419580_P001 agpv5Zea mays6E-11134446640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.096; M0.107; S0.032; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 351 aa (-cTP 309)
Molecular Weight 39.13 kDA(-cTP )
PI 5.78(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help