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AT1G03330.1
Small nuclear ribonucleoprotein family protein
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| Lab Annot. |
small nuclear ribonucleoprotein D, / snRNP core SM-like protein,
Mapman: 27.1 RNA.processing |
| Curated Location |
not plastid (supported by in-house exprements)
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DUF1256(1) LSM(1) LSM14(1) SM-ATX(1) |
| TargetP: |
Cytoplasm (Class 5 C0.082; M0.082; S0.427; _0.610) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
93 aa (-cTP 82) |
| Molecular Weight |
10.69 kDA(-cTP ) |
| PI |
6.82(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1351 | Detail | | | | | | | | leaf [A. thaliana] | total tissue | t1-t2 |
| 1392 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1394 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1396 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpt1xclpt2 (rep. 2) |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1406 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1495 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1496 | Detail | | | | | | | | leaf [A. thaliana] | | Prep1_Prep2_t1_t2 |
| 1596 | Detail | | | | | | | | [A. thaliana] | | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
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Comparative Proteomics Data
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