PPDB

PPDB	The Plant Proteome Database

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AT1G03060.1 BEACH-DOMAIN HOMOLOG A1

Lab Annot.

WD-40 repeat protein / beige-related
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G03060.2 11 Arabidopsis thaliana 0 3601 99 99 0 (0) C
AT1G03060.4 11 Arabidopsis thaliana 0 3601 99 99 0 (0) C
AT1G03060.3 11 Arabidopsis thaliana 0 3601 99 99 0 (0) C
Os03g53280.1 7 Oryza sativa 0 3551 65 79 4 (4) C
Os02g06720.1 7 Oryza sativa 4E-108 421 48 64 2 (2) _
Os02g44380.2 7 Oryza sativa 2E-86 573 35 51 0 (0) _
Zm00001eb056940_P001 agpv5 Zea mays 0 3581 64 79 0 (0) C
v1_GRMZM2G150183_P01 4a53 Zea mays 0 2157 65 79 0 (0) M
GRMZM2G056645_P01 3.21 Zea mays 0 2160 65 79 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beach(1) DUF4704(6) Laminin_G_3(1) PH_BEACH(1) WD40(4)
TargetP:	Chloroplast (Class 3 C0.706; M0.039; S0.008; _0.285)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	3601 aa (-cTP 3520)
Molecular Weight	400.89 kDA(-cTP 391.83)
PI	5.75(-cTP 5.76)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
738	Detail								[A. thaliana]
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
20733066(ABA effected phosphoproteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data