PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G02880.3   thiamin pyrophosphokinase1
Lab Annot. thiamin pyrophosphokinase1
Mapman: 18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G02880.6 11Arabidopsis thaliana027397970 (0)_
AT1G02880.2 11Arabidopsis thaliana026410010013 (2)_
AT2G44750.2 11Arabidopsis thaliana026791940 (0)S
Os01g70580.1 7Oryza sativa6E-11926461750 (0)C
Os01g25440.1 7Oryza sativa2E-11725961780 (0)M
Os05g30454.1 7Oryza sativa8E-11526459750 (0)S
Zm00001eb142350_P001 agpv5Zea mays5E-11726061750 (0)C
Zm00001eb131550_P003 agpv5Zea mays3E-11625662780 (0)_
Zm00001eb131550_P004 agpv5Zea mays3E-11625761780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: TPK_B1_binding(1) TPK_catalytic(1)
TargetP: Cytoplasm (Class 5 C0.326; M0.061; S0.184; _0.370)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 267 aa (-cTP 251)
Molecular Weight 29.88 kDA(-cTP )
PI 5.31(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help