PPDB

The Plant Proteome Database

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AT1G02816.1   pectinesterase (Protein of unknown function%2C DUF538)

Lab Annot. unknown protein with DUF538 domain (likely vacuolar)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02370.1 11Arabidopsis thaliana1E-81166718026 (20)S
AT4G02360.1 11Arabidopsis thaliana4E-47146546410 (10)S
AT1G02813.1 11Arabidopsis thaliana7E-4014544630 (0)S
Os05g29900.1 7Oryza sativa8E-5212462760 (0)S
Os05g29920.1 7Oryza sativa2E-5013059700 (0)S
Os12g09620.1 7Oryza sativa1E-3012742600 (0)S
Zm00001eb346540_P001 agpv5Zea mays6E-4813057690 (0)S
GRMZM2G023520_P01 3.21Zea mays7E-4812958697 (7)M
v1_GRMZM2G023520_P01 4a53Zea mays7E-4812958698 (8)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF538(1)
TargetP: Secreted (Class 1 C0.020; M0.008; S0.983; _0.094)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 166 aa (-cTP 144)
Molecular Weight 18.50 kDA(-cTP )
PI 5.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17151019(vacuole - suspension cell)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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