PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G02810.1   Plant invertase/pectin methylesterase inhibitor superfamily
Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02330.1 11Arabidopsis thaliana058475860 (0)S
AT2G47550.1 11Arabidopsis thaliana058662750 (0)S
AT3G10720.2 11Arabidopsis thaliana3E-16955447630 (0)S
Os01g20980.1 7Oryza sativa055356690 (0)S
Os05g29790.1 7Oryza sativa059250660 (0)S
Os07g47830.1 7Oryza sativa8E-13756243570 (0)S
Zm00001eb130480_P001 agpv5Zea mays057753680 (0)S
GRMZM2G128682_P01 3.21Zea mays056052670 (0)S
v1_GRMZM2G128682_P01 4a53Zea mays056052670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pectate_lyase_3(2) Pectinesterase(1) PMEI(1)
TargetP: Secreted (Class 2 C0.173; M0.006; S0.868; _0.021)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 579 aa (-cTP 518)
Molecular Weight 63.95 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help