PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G02730.1   cellulose synthase-like D5
Lab Annot.
Mapman: 10.2.1 cell wall.cellulose synthesis.cellulose synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G03050.1 11Arabidopsis thaliana0116465770 (0)C
AT5G16910.1 11Arabidopsis thaliana0116963760 (0)C
AT4G38190.1 11Arabidopsis thaliana0117859720 (0)C
Os12g36890.1 7Oryza sativa0123167760 (0)C
Os06g02180.1 7Oryza sativa0114664772 (2)M
Os10g42750.1 7Oryza sativa0116462760 (0)C
GRMZM2G015886_P01 3.21Zea mays0123069781 (1)C
Zm00001eb410030_P002 agpv5Zea mays0123069780 (0)C
Zm00001eb410030_P001 agpv5Zea mays0123069780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Baculo_IE-1(1) Cellulose_synt(1) Glyco_trans_2_3(2) Glycos_transf_2(1) Xin(1) zf
TargetP: Chloroplast (Class 1 C0.972; M0.038; S0.008; _0.045)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 1181 aa (-cTP 1123)
Molecular Weight 132.59 kDA(-cTP 126.65)
PI 8.00(-cTP 6.86)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21533090(plasmodesmata-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help