PPDB

PPDB	The Plant Proteome Database

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AT1G02460.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01890.1 11 Arabidopsis thaliana 0 416 74 85 0 (0) S
AT1G56710.1 11 Arabidopsis thaliana 0 410 60 79 0 (0) S
AT1G48100.1 11 Arabidopsis thaliana 0 463 54 71 0 (0) M
Os01g19170.1 7 Oryza sativa 0 470 55 72 0 (0) S
Os05g20020.1 7 Oryza sativa 7E-177 460 54 72 0 (0) S
Os01g22590.1 7 Oryza sativa 5E-145 418 51 68 0 (0) C
v1_GRMZM2G170388_P01 4a53 Zea mays 0 402 60 78 1 (1) S
Zm00001eb129970_P001 agpv5 Zea mays 0 402 60 78 0 (0) S
GRMZM2G170388_P01 3.21 Zea mays 0 402 60 78 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) End_N_terminal(1) Glyco_hydro_28(1) Mito_fiss_reg(1) NosD(1) Pecta
TargetP:	Mitochondria (Class 4 C0.081; M0.286; S0.063; _0.059)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	491 aa (-cTP 468)
Molecular Weight	53.46 kDA(-cTP )
PI	6.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data