PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G02400.1   gibberellin 2-oxidase 6
Lab Annot.
Mapman: 17.6.1.13 hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G02400.2 11Arabidopsis thaliana026595950 (0)_
AT1G47990.1 11Arabidopsis thaliana2E-9932749620 (0)_
AT1G30040.1 11Arabidopsis thaliana4E-9630644660 (0)_
Os05g06670.1 7Oryza sativa5E-9633246620 (0)_
Os01g55240.1 7Oryza sativa1E-8330546620 (0)_
Os05g43880.1 7Oryza sativa5E-7332340560 (0)_
GRMZM2G078798_P03 3.21Zea mays1E-10735547620 (0)_
Zm00001eb282550_P001 agpv5Zea mays1E-10735547620 (0)_
v1_GRMZM2G078798_P03 4a53Zea mays1E-10735547620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(2) DUF3910(1)
TargetP: Cytoplasm (Class 4 C0.374; M0.098; S0.068; _0.675)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 329 aa (-cTP 320)
Molecular Weight 36.84 kDA(-cTP )
PI 6.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help