PPDB

The Plant Proteome Database

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AT1G02340.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 30.11 signalling.light
Curated Location
TAIR curated location: nucleus15705947,10995393
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G02340.2 11Arabidopsis thaliana02851001000 (0)_
AT1G09530.2 11Arabidopsis thaliana5E-1611640590 (0)_
AT1G09530.1 11Arabidopsis thaliana5E-1611640590 (0)_
Os03g56950.1 7Oryza sativa6E-1714739570 (0)_
Os03g56950.2 7Oryza sativa6E-1714739570 (0)_
Os03g56950.7 7Oryza sativa7E-1714738560 (0)_
Zm00001eb059460_P005 agpv5Zea mays2E-1718334500 (0)_
Zm00001eb059460_P004 agpv5Zea mays2E-1714039560 (0)C
GRMZM2G065374_P01 3.21Zea mays2E-1714039560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(2) MRC1(1)
TargetP: Cytoplasm (Class 3 C0.134; M0.175; S0.095; _0.770)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 292 aa (-cTP 273)
Molecular Weight 33.61 kDA(-cTP )
PI 6.98(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help