PPDB

PPDB	The Plant Proteome Database

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AT1G02170.1 metacaspase 1

Lab Annot.

metacaspase 1 (Type I) LOL3 (LSD ONE LIKE 3)
Mapman: 29.5.3.2.2* protein.degradation.cysteine protease.CD.C14

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25110.1 11 Arabidopsis thaliana 5E-140 417 52 65 0 (0) M
AT4G25110.2 11 Arabidopsis thaliana 2E-137 417 52 64 0 (0) M
AT5G64240.2 11 Arabidopsis thaliana 2E-103 290 53 67 0 (0) M
Os03g27210.1 7 Oryza sativa 1E-118 367 50 64 0 (0) M
Os03g27170.1 7 Oryza sativa 9E-111 394 47 60 0 (0) C
Os03g27120.1 7 Oryza sativa 2E-96 356 46 62 0 (0) _
GRMZM2G155422_P01 3.21 Zea mays 0 355 74 84 0 (0) M
Zm00001eb023930_P001 agpv5 Zea mays 0 355 74 84 0 (0) M
Zm00001eb023930_P002 agpv5 Zea mays 0 355 74 84 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_1(1) Peptidase_C14(1) zf-LSD1(1) zinc_ribbon_4(2)
TargetP:	Chloroplast (Class 3 C0.731; M0.174; S0.019; _0.120)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	367 aa (-cTP 332)
Molecular Weight	39.79 kDA(-cTP 36.05)
PI	7.15(-cTP 6.47)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data