PPDB

PPDB	The Plant Proteome Database

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AT1G02060.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G37230.1 11 Arabidopsis thaliana 5E-112 672 32 52 51 (49) M
AT1G12700.1 11 Arabidopsis thaliana 2E-59 404 30 52 0 (0) M
AT5G39710.1 11 Arabidopsis thaliana 2E-59 487 29 50 0 (0) M
Os02g02950.1 7 Oryza sativa 6E-135 507 42 62 0 (0) _
Os02g02020.1 7 Oryza sativa 3E-101 661 32 52 2 (2) M
Os07g42880.1 7 Oryza sativa 2E-61 481 28 48 0 (0) M
Zm00001eb230400_P001 agpv5 Zea mays 2E-131 507 42 61 0 (0) _
v1_GRMZM2G096665_P01 4a53 Zea mays 2E-131 507 42 61 0 (0) _
GRMZM2G096665_P01 3.21 Zea mays 2E-131 507 42 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) Atypical_Card(2) Mad3_BUB1_I(2) MRP-S27(4) PPR(12) PPR_1(12) PPR_2(11)
TargetP:	Chloroplast (Class 2 C0.845; M0.120; S0.020; _0.054)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	710 aa (-cTP 689)
Molecular Weight	80.83 kDA(-cTP 78.53)
PI	8.68(-cTP 8.48)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21988472(vacuole (unfiltered data))

Comparative Proteomics Data