PPDB

PPDB	The Plant Proteome Database

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AT1G02040.1 C2H2-type zinc finger family protein

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G17180.1 11 Arabidopsis thaliana 4E-25 166 37 53 0 (0) C
AT4G35280.1 11 Arabidopsis thaliana 1E-24 142 42 49 0 (0) C
AT2G45120.1 11 Arabidopsis thaliana 7E-19 155 36 47 0 (0) M
Os04g46670.1 7 Oryza sativa 3E-28 308 32 44 0 (0) C
Os03g32220.1 7 Oryza sativa 1E-16 141 33 46 0 (0) _
Os10g40660.1 7 Oryza sativa 1E-14 214 31 36 0 (0) M
Zm00001eb429620_P002 agpv5 Zea mays 2E-26 198 36 43 0 (0) S
GRMZM2G402027_P01 3.21 Zea mays 2E-26 198 36 43 0 (0) C
v1_GRMZM2G402027_P01 4a53 Zea mays 2E-26 198 36 43 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Astro_capsid_p(1) Autophagy_act_C(1) C1_4(2) CDC45(1) CENP-B_dimeris(1) DNA_pol_
TargetP:	Cytoplasm (Class 5 C0.056; M0.361; S0.022; _0.526)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	324 aa (-cTP 250)
Molecular Weight	36.60 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data