PPDB

The Plant Proteome Database

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AT1G01940.1   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot. Cyclophilin-like peptidyl-prolyl cis-trans isomerase
Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36130.1 11Arabidopsis thaliana3E-54151526821 (17)_
AT5G67530.1 11Arabidopsis thaliana7E-5315552651 (1)_
AT3G44600.1 11Arabidopsis thaliana7E-5015250693 (3)_
Os06g04000.1 7Oryza sativa2E-10915989952 (2)_
Os03g10400.2 7Oryza sativa1E-5815556690 (0)_
Os08g44520.3 7Oryza sativa3E-5315152670 (0)_
Zm00001eb269630_P001 agpv5Zea mays6E-10815987950 (0)_
Zm00001eb378260_P001 agpv5Zea mays2E-10715987950 (0)_
v1_GRMZM2G118687_P01 4a53Zea mays2E-10415987950 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pro_isomerase(1)
TargetP: Cytoplasm (Class 4 C0.067; M0.099; S0.355; _0.719)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 160 aa (-cTP 143)
Molecular Weight 17.50 kDA(-cTP )
PI 8.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
291Detail       leaf [Zea Mays] plastid stroma 

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help