PPDB

 The Plant Proteome Database

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AT1G01900.1   subtilase family protein
Lab Annot. subtilase SBT1.1 (target proPSK)
Mapman: 29.5.5.4.1* protein.degradation.serine protease.SB.S8
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G67360.1 11Arabidopsis thaliana07644764660 (203)S
AT5G51750.1 11Arabidopsis thaliana0775446275 (19)S
AT2G05920.1 11Arabidopsis thaliana07524461420 (65)S
Os04g48416.1 7Oryza sativa0723466411 (11)S
Os03g55350.1 7Oryza sativa0742456112 (12)S
Os03g13930.1 7Oryza sativa071145630 (0)S
GRMZM2G414915_P01 3.21Zea mays072448635 (4)S
v1_GRMZM2G414915_P01 4a53Zea mays072448637 (7)S
Zm00001eb428570_P001 agpv5Zea mays072448630 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: fn3_6(1) Inhibitor_I9(1) PA(1) Peptidase_S8(1)
TargetP: Secreted (Class 3 C0.027; M0.155; S0.673; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 774 aa (-cTP 738)
Molecular Weight 83.25 kDA(-cTP )
PI 8.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15593128(Cell Wall proteome)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help