PPDB

PPDB	The Plant Proteome Database

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AT1G01860.1 Ribosomal RNA adenine dimethylase family protein

Lab Annot.

rRNA methylase - PFC1 (PALEFACE 1)
Mapman: 27.1 RNA.processing

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G01860.4 11 Arabidopsis thaliana 0 322 100 100 0 (0) C
AT1G01860.2 11 Arabidopsis thaliana 0 264 100 100 0 (0) _
AT1G01860.3 11 Arabidopsis thaliana 2E-177 243 100 100 0 (0) _
Os02g03050.1 7 Oryza sativa 2E-92 212 62 77 0 (0) _
Os02g03050.2 7 Oryza sativa 3E-77 177 64 78 0 (0) _
Os10g10434.1 7 Oryza sativa 4E-26 230 36 51 7 (7) _
v1_GRMZM2G174669_P01 4a53 Zea mays 5E-134 306 61 78 2 (2) C
Zm00001eb208500_P004 agpv5 Zea mays 5E-134 306 61 78 0 (0) C
GRMZM2G174669_P01 3.21 Zea mays 5E-134 306 61 78 10 (10) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CRS1_YhbY(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_23(1) Methyltran
TargetP:	Chloroplast (Class 1 C0.967; M0.028; S0.024; _0.066)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	343 aa (-cTP 295) (-lTP 251)
Molecular Weight	38.02 kDA(-cTP 32.96)(-lTP 28.08)
PI	8.77(-cTP 7.93)(-lTP 6.748)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data