PPDB

The Plant Proteome Database

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AT1G01710.1   acyl-CoA thioesterase II

Lab Annot. acyl-CoA thioesterase
Mapman: 11.9.4.5 lipid metabolism.lipid degradation.beta-oxidation.acylCoAthioesterase
Curated Location peroxisome
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G00520.2 11Arabidopsis thaliana042868820 (0)_
AT4G00520.4 11Arabidopsis thaliana039168810 (0)_
AT4G00520.3 11Arabidopsis thaliana039168810 (0)_
Os04g47120.1 7Oryza sativa042960780 (0)_
Zm00001eb429310_P004 agpv5Zea mays042960780 (0)_
Zm00001eb429310_P005 agpv5Zea mays045956730 (0)_
Zm00001eb429310_P006 agpv5Zea mays4E-17538160780 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 4HBT_3(1) Acyl_CoA_thio(2) cNMP_binding(1)
TargetP: Cytoplasm (Class 4 C0.149; M0.101; S0.245; _0.626)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 427 aa (-cTP 407)
Molecular Weight 48.15 kDA(-cTP )
PI 7.21(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help