PPDB

The Plant Proteome Database

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AT1G01620.2   plasma membrane intrinsic protein 1C

Lab Annot. water channel (PIP1C)
Mapman: 34.19.1 transport.Major Intrinsic Proteins.PIP
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01620.1 11Arabidopsis thaliana6E-15521410010095 (80)_
AT4G00430.1 11Arabidopsis thaliana4E-152214979974 (65)_
AT4G23400.1 11Arabidopsis thaliana6E-1492149598194 (174)_
Os04g47220.1 7Oryza sativa6E-1372148894242 (242)C
Os02g44630.1 7Oryza sativa8E-137214879480 (80)_
Os02g44630.2 7Oryza sativa8E-137214879480 (80)_
Zm00001eb249940_P002 agpv5Zea mays9E-13621487940 (0)_
AC209208.3_FGP002 3.21Zea mays9E-136214879465 (63)_
v1_AC209208.3_FGP002 4a53Zea mays9E-136214879447 (47)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MIP(1)
TargetP: Secreted (Class 4 C0.007; M0.160; S0.628; _0.243)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 214 aa (-cTP 141)
Molecular Weight 22.52 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1745Detail        [A. thaliana] Col-0
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17293592(total seedlings û light and dark grown)
17432890(leaf total membranes)
17660356(tonoplast (Brassica oleracea buds))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
20061580(chloroplast envelope (inner+outer))
21325567(root-proteome (wt & det3))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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