PPDB

The Plant Proteome Database

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AT1G01610.1   glycerol-3-phosphate acyltransferase 4

Lab Annot. GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4)
Mapman: 11.3 lipid metabolism.Phospholipid synthesis
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G00400.1 11Arabidopsis thaliana050090951 (1)_
AT2G38110.1 11Arabidopsis thaliana049863781 (1)_
AT3G11430.1 11Arabidopsis thaliana5E-15547949660 (0)_
Os01g63580.1 7Oryza sativa0496607822 (22)_
Os02g02340.1 7Oryza sativa3E-18049357740 (0)M
Os10g27330.1 7Oryza sativa3E-17349552680 (0)_
GRMZM2G083195_P01 3.21Zea mays0491607815 (15)_
v1_GRMZM2G083195_P01 4a53Zea mays0491607814 (14)_
Zm00001eb147550_P001 agpv5Zea mays049160780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Acyltransferase(1) HAD(1)
TargetP: Cytoplasm (Class 2 C0.035; M0.116; S0.062; _0.835)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 2 TMs
TAT position:
Length 503 aa (-cTP 478)
Molecular Weight 56.26 kDA(-cTP )
PI 9.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2013Detail       leaf [A. thaliana] total leaf tissue wt

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help