PPDB

 The Plant Proteome Database

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AT1G01300.1   Eukaryotic aspartyl protease family protein
Lab Annot. aspartic protease
Mapman: 29.5.4.1.1* protein.degradation.aspartate protease.AA.A1
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61820.1 11Arabidopsis thaliana04926678253 (66)S
AT3G18490.1 11Arabidopsis thaliana4E-1264574963328 (142)C
AT1G25510.1 11Arabidopsis thaliana5E-12640152670 (0)S
Os01g41550.1 7Oryza sativa7E-16646257691 (1)S
Os05g51220.1 7Oryza sativa2E-15145555690 (0)S
Os01g04710.1 7Oryza sativa2E-12535656690 (0)M
Zm00001eb161290_P001 agpv5Zea mays4E-15642159700 (0)S
GRMZM2G042008_P01 3.21Zea mays4E-15642159707 (5)S
v1_GRMZM2G042008_P01 4a53Zea mays4E-15642159709 (9)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Asp(1) TAXi_C(1) TAXi_N(1)
TargetP: Secreted (Class 2 C0.018; M0.133; S0.757; _0.001)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 485 aa (-cTP 446)
Molecular Weight 52.17 kDA(-cTP )
PI 9.22(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1749Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1756Detail       leaf [A. thaliana] total leaf tissue Col_0
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2246Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2296Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 17432890(leaf total membranes)
19200160(flower-stage 12)
19334764(plasma membrane (cell culture))
19714877(interactomes 14-3-3 complexes (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help