PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G01200.1   RAB GTPase homolog A3
Lab Annot.
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47960.1 11Arabidopsis thaliana7E-87214617716 (16)S
AT3G12160.1 11Arabidopsis thaliana2E-8620263788 (8)S
AT5G65270.1 11Arabidopsis thaliana1E-85218587642 (40)_
Os09g35860.1 7Oryza sativa2E-9922566770 (0)_
Os10g23100.1 7Oryza sativa3E-86217627426 (26)S
Os09g10940.1 7Oryza sativa5E-8621761769 (9)_
GRMZM2G052509_P01 3.21Zea mays5E-8822662752 (0)_
Zm00001eb319220_P001 agpv5Zea mays5E-8822662750 (0)_
v1_GRMZM2G052509_P01 4a53Zea mays5E-8822662750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) Arf(1) GTP_EFTU(1) MMR_HSR1(1) PduV-EutP(1) Ras(1) Roc(1) SRPRB(1) Tni
TargetP: Cytoplasm (Class 1 C0.041; M0.130; S0.093; _0.979)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 237 aa (-cTP 164)
Molecular Weight 26.25 kDA(-cTP )
PI 5.52(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 14617066(Nuclear proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help