PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G01050.1   pyrophosphorylase 1

Lab Annot. inorganic diphosphatase/ pyrophosphatase (AtPPA1)
Mapman: 23.4.99 nucleotide metabolism.phosphotransfer and pyrophosphatases.misc
Curated Location cytosol (Pubmed: 22566496 )

TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01050.2 11Arabidopsis thaliana5E-1582121001000 (0)M
AT2G46860.1 11Arabidopsis thaliana4E-14121089950 (0)_
AT4G01480.2 11Arabidopsis thaliana1E-14021489920 (0)_
Os05g36260.1 7Oryza sativa2E-13220485930 (0)_
Os04g59040.1 7Oryza sativa6E-13221383918 (8)_
Os10g26600.1 7Oryza sativa1E-13120185950 (0)_
GRMZM2G026470_P01 3.21Zea mays4E-13420189931 (0)_
Zm00001eb348520_P001 agpv5Zea mays4E-13420189930 (0)_
v1_GRMZM2G026470_P01 4a53Zea mays4E-13420189930 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pyrophosphatase(1)
TargetP: Mitochondria (Class 5 C0.179; M0.404; S0.038; _0.382)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 212 aa (-cTP 210)
Molecular Weight 24.48 kDA(-cTP )
PI 5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2013Detail       leaf [A. thaliana] total leaf tissue wt
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
19888209(leaves)
19508356(mature pollen grains and pollen tubes)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help