PPDB

PPDB	The Plant Proteome Database

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AT1G01040.1 dicer-like 1

Lab Annot.

dicer-like 1
Mapman: 27.1.20 RNA.processing.degradation dicer

Curated Location

TAIR curated location: nucleus15821876

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G01040.2 11 Arabidopsis thaliana 0 1910 99 99 3 (3) _
AT3G43920.6 11 Arabidopsis thaliana 3E-113 800 34 52 0 (0) _
AT3G43920.1 11 Arabidopsis thaliana 2E-112 800 34 52 0 (0) _
Os03g02970.1 7 Oryza sativa 0 1735 74 84 0 (0) _
Os10g34430.1 7 Oryza sativa 3E-108 757 33 51 0 (0) M
Os03g38740.1 7 Oryza sativa 4E-105 703 34 51 0 (0) _
Zm00001eb143950_P002 agpv5 Zea mays 0 1455 31 49 0 (0) S
Zm00001eb001570_P001 agpv5 Zea mays 0 1942 70 80 0 (0) _
Zm00001eb001570_P002 agpv5 Zea mays 0 1942 70 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) Dicer_dimer(3) DND1_DSRM(2) dsrm(3) Helicase_C(1) PAZ(1) ResIII(1) Ribon
TargetP:	Cytoplasm (Class 2 C0.074; M0.097; S0.138; _0.891)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1909 aa (-cTP 1813)
Molecular Weight	213.57 kDA(-cTP )
PI	5.88(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data