PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G64100.1   Peroxidase superfamily protein

Lab Annot. Peroxidase protein
Mapman: 26.12 misc.peroxidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64110.1 11Arabidopsis thaliana9E-147328657436 (26)S
AT5G64120.1 11Arabidopsis thaliana9E-118329566813 (11)S
AT5G39580.1 11Arabidopsis thaliana2E-11532655680 (0)S
Os01g07770.1 7Oryza sativa1E-9732949600 (0)S
Os04g53640.1 7Oryza sativa3E-8533444560 (0)S
Os07g01370.1 7Oryza sativa3E-8430347590 (0)M
GRMZM2G448051_P01 3.21Zea mays3E-8534844570 (0)S
v1_GRMZM2G448051_P01 4a53Zea mays3E-8534844570 (0)S
Zm00001eb431400_P001 agpv5Zea mays3E-8534844570 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: peroxidase(1)
TargetP: Secreted (Class 4 C0.011; M0.117; S0.511; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 331 aa (-cTP 274)
Molecular Weight 35.68 kDA(-cTP )
PI 9.47(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1749Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
16618929(UNKNOWN-LOPIT-callus)
17293592(total seedlings û light and dark grown)
18436743(specific to roots)
18796151(cell wall (hypocotyl))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help