PPDB

The Plant Proteome Database

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AT5G61890.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07310.1 11Arabidopsis thaliana1E-8626963720 (0)_
AT5G13330.1 11Arabidopsis thaliana3E-4212463680 (0)_
AT2G33710.1 11Arabidopsis thaliana3E-3715848590 (0)_
Os04g32620.1 7Oryza sativa4E-389469800 (0)M
Os09g28440.1 7Oryza sativa4E-255777890 (0)_
Os09g26420.4 7Oryza sativa1E-247561700 (0)_
GRMZM2G425798_P02 3.21Zea mays2E-3915951620 (0)C
v1_GRMZM2G425798_P01 4a53Zea mays2E-3915951620 (0)C
GRMZM2G087059_P02 3.21Zea mays6E-3915551610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 2 C0.077; M0.165; S0.046; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 248 aa (-cTP 224)
Molecular Weight 27.73 kDA(-cTP )
PI 5.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help