PPDB

PPDB	The Plant Proteome Database

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AT5G55200.1 Co-chaperone GrpE family protein

Lab Annot.

co-chaperone grpE protein
Mapman: 29.6 protein.folding

Curated Location

mitochondria

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G26780.1 11 Arabidopsis thaliana 1E-120 332 59 71 48 (43) M
AT5G17710.1 11 Arabidopsis thaliana 1E-06 150 24 44 518 (408) C
AT5G17710.3 11 Arabidopsis thaliana 1E-06 150 24 44 0 (0) C
Os09g11250.1 7 Oryza sativa 1E-85 249 57 70 7 (7) M
Os08g25090.2 7 Oryza sativa 9E-80 233 55 72 21 (21) M
Os08g25090.1 7 Oryza sativa 6E-77 204 59 76 22 (22) M
Zm00001eb097390_P001 agpv5 Zea mays 2E-89 248 58 71 0 (0) M
GRMZM2G030312_P01 3.21 Zea mays 2E-89 248 58 71 19 (19) M
Zm00001eb177440_P001 agpv5 Zea mays 6E-77 298 48 63 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2514(1) DUF3130(2) GrpE(1) HTH_53(1) IZUMO(2) Phage_Gp23(1)
TargetP:	Mitochondria (Class 5 C0.601; M0.743; S0.002; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	302 aa (-cTP 225)
Molecular Weight	33.20 kDA(-cTP )
PI	6.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2028	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17137349(ATP-binding-mitochondria cell suspension)
18385124(mitochondria - leaf and suspension cell)
18385124(mitochondria)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20018591(strong Cu2+ binding (mitochondria - cell culture))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data