PPDB

 The Plant Proteome Database

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AT5G54000.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Lab Annot.
Mapman: 17.5.1 hormone metabolism.ethylene.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54000.2 11Arabidopsis thaliana02691001000 (0)_
AT5G20400.1 11Arabidopsis thaliana3E-15726976880 (0)_
AT1G49390.2 11Arabidopsis thaliana1E-15126973850 (0)_
Os02g17940.3 7Oryza sativa8E-8427443650 (0)_
Os02g17940.2 7Oryza sativa8E-8427443650 (0)_
Os02g17940.6 7Oryza sativa8E-8427443650 (0)_
v1_GRMZM2G162158_P01 4a53Zea mays6E-8525246670 (0)_
Zm00001eb027940_P001 agpv5Zea mays6E-8525246670 (0)_
GRMZM2G162158_P01 3.21Zea mays6E-8525246670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2OG-FeII_Oxy(2) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.163; M0.092; S0.120; _0.910)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 269 aa (-cTP 263)
Molecular Weight 31.22 kDA(-cTP )
PI 6.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help