PPDB

The Plant Proteome Database

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AT5G52290.1   shortage in chiasmata 1

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g42910.1 7Oryza sativa3E-6932345640 (0)M
Zm00001eb248620_P003 agpv5Zea mays9E-7032546650 (0)_
Zm00001eb248620_P002 agpv5Zea mays1E-6932546650 (0)M
Zm00001eb248620_P001 agpv5Zea mays1E-6932546650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 4 C0.049; M0.307; S0.159; _0.558)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 1594 aa (-cTP 1580)
Molecular Weight 179.45 kDA(-cTP )
PI 4.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help