PPDB

The Plant Proteome Database

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AT5G50990.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62890.1 11Arabidopsis thaliana1E-13351640610 (0)C
AT5G66520.1 11Arabidopsis thaliana1E-12950640604 (4)_
AT4G21065.2 11Arabidopsis thaliana5E-12842844650 (0)_
Os03g60690.1 7Oryza sativa2E-12750338580 (0)C
Os07g02280.1 7Oryza sativa5E-12748640600 (0)C
Os07g05560.1 7Oryza sativa6E-12453539560 (0)M
Zm00001eb396480_P002 agpv5Zea mays6E-16350645660 (0)M
Zm00001eb396480_P003 agpv5Zea mays6E-16350645660 (0)M
v1_GRMZM2G306482_P01 4a53Zea mays6E-16350645660 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DSX_dimer(1) DYW_deaminase(1) PPR(7) PPR_1(6) PPR_2(6) PPR_3(8) PPR_long(2) Pput
TargetP: Mitochondria (Class 4 C0.107; M0.451; S0.101; _0.087)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 534 aa (-cTP 514)
Molecular Weight 60.04 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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