PPDB

PPDB	The Plant Proteome Database

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AT5G44070.1 phytochelatin synthase 1 (PCS1)

Lab Annot.

phytochelatin synthase 1 (PCS1)
Mapman: 15.2 metal handling.binding, chelation and storage

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G44070.2 11 Arabidopsis thaliana 0 449 100 100 0 (0) _
AT1G03980.3 11 Arabidopsis thaliana 0 484 78 87 0 (0) _
AT1G03980.2 11 Arabidopsis thaliana 0 506 74 83 0 (0) _
Os06g01260.1 7 Oryza sativa 0 494 57 72 0 (0) _
Os05g34290.1 7 Oryza sativa 1E-120 225 68 85 0 (0) C
Os06g01260.2 7 Oryza sativa 1E-95 321 49 63 0 (0) _
GRMZM2G091228_P01 3.21 Zea mays 0 494 56 73 0 (0) M
v1_GRMZM2G091228_P01 4a53 Zea mays 0 494 56 73 0 (0) M
Zm00001eb338260_P002 agpv5 Zea mays 0 494 56 73 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Peptidase_C39_2(2) Phytochelatin(1) Phytochelatin_C(2)
TargetP:	Cytoplasm (Class 3 C0.139; M0.144; S0.049; _0.592)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	485 aa (-cTP 482)
Molecular Weight	54.47 kDA(-cTP )
PI	6.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2287	Detail								[A. thaliana]		Clp C1 WT
2290	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2302	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2314	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data