PPDB

The Plant Proteome Database

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AT5G43620.1   Pre-mRNA cleavage complex II

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66500.1 11Arabidopsis thaliana041790920 (0)M
AT4G04885.1 11Arabidopsis thaliana2E-4617950610 (0)C
AT2G36480.1 11Arabidopsis thaliana7E-2323432440 (0)C
Os08g08830.1 7Oryza sativa3E-3917745584 (4)_
Os09g39270.1 7Oryza sativa3E-1917732450 (0)C
Zm00001eb413150_P001 agpv5Zea mays3E-3817744580 (0)M
GRMZM2G012761_P02 3.21Zea mays4E-3817744580 (0)C
Zm00001eb413150_P004 agpv5Zea mays4E-3817744580 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-C2H2_2(2) zf-C2H2_4(1) zf_UBZ(1)
TargetP: Cytoplasm (Class 5 C0.265; M0.275; S0.012; _0.455)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 410 aa (-cTP 402)
Molecular Weight 46.05 kDA(-cTP )
PI 9.14(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help